BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015D08LP1|AL426839
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig247 911 0.0
>3x_Contig247
Length = 997
Score = 911 bits (459), Expect = 0.0
Identities = 460/461 (99%)
Strand = Plus / Plus
Query: 518 tctgtgatagctgcattatcataagtagtgcaattaatcatagcgggatccaaatggtat 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgtgatagctgcattatcataagtagtgcaattaatcatagcgggatccaaatggtat 60
Query: 578 atcacatccttgtaattatttttgatcacatcccacttcttttctattctatctttaaga 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcacatccttgtaattatttttgatcacatcccacttcttttctattctatctttaaga 120
Query: 638 gtgctttcaaacactagccaatattcatttggcatcggccttacacccattgttaatctg 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgctttcaaacactagccaatattcatttggcatcggccttacacccattgttaatctg 180
Query: 698 tattcaccaggcttgaaaggttggtaagggaaaggtggtgtatcgaaccataatttgtaa 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattcaccaggcttgaaaggttggtaagggaaaggtggtgtatcgaaccataatttgtaa 240
Query: 758 tccctttctgctgtagatggctggatgtctttcatgaaactcacaggttcccatctctct 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccctttctgctgtagatggctggatgtctttcatgaaactcacaggttcccatctctct 300
Query: 818 tcttgcttatcaccgttatcttttagcgcagtacttttcttatcaatatcatcagcgaaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcttgcttatcaccgttatcttttagcgcagtacttttcttatcaatatcatcagcgaaa 360
Query: 878 acatcgtcactaatgttcacactggaattaatttgtttcgcatcgccacaaaccagatct 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acatcgtcactaatgttcacactggaattaatttgtttcgcatcgccacaaaccagatct 420
Query: 938 ttatacaattgatacgaaacgtagcaaaatagtgggraagt 978
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 421 ttatacaattgatacgaaacgtagcaaaatagtgggaaagt 461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7263
Number of Sequences: 1807
Number of extensions: 7263
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)